Average Clinical Project Manager Salary in Cape Town, South Africa for 2026

In this article, we will look at the average Clinical Project Manager salary for 2026 in Cape Town and how that compares to other countries and professions. We'll also look at interesting salary data points like median salary, 25th and 75th percentile salaries, salary amounts based on experience, bonus ranges and more!

The data in this article has been compiled using official government salary data, salary surveys, and other sources such as job postings which contain salary information.

All salary information is in the local currency, which is the South African rand. To keep things simple, we are using the ZAR currency code instead of the currency symbol R.

How Much Does a Clinical Project Manager Make in Cape Town?

A Clinical Project Manager working in Cape Town will typically earn around 492,700 ZAR per year, and this can range from the lowest average salary of about 228,500 ZAR to the highest average salary of 783,800 ZAR.

Average Annual Salary492,700 ZAR
Average Monthly Salary41,058 ZAR
Average Lowest Salary228,500 ZAR
Lowest Monthly Salary19,041 ZAR
Average Highest Salary783,800 ZAR
Highest Monthly Salary65,316 ZAR

These are average salaries for a Clinical Project Manager in Cape Town and include benefits such as housing and transport. It's also possible for a Clinical Project Manager to earn more or less than the average salaries shown above.

Clinical Project Manager salaries will vary a lot based on your experience, location, skills, and gender. Keep reading below to research more data on each of these areas.

Distribution of Clinical Project Manager Salaries in Cape Town

So we've looked at the average salaries a Clinical Project Manager will earn in Cape Town. The next interesting data point is the distribution of salaries.

Salary ranges

We already know that a Clinical Project Manager can earn between 228,500 ZAR and 783,800 ZAR on average in Cape Town. This is known as the range in statistics.

The difference between the maximum and minimum values is a good indicator of variability in salaries, and can be used by employers to figure out how much they can expect to pay, and for employees to know how much they can earn.

Median salary

The median salary for a Clinical Project Manager in Cape Town is 533,000 ZAR. This is the middle value in the distribution of salaries.

What this means is that approximately 50% of the population earn less than 533,000 ZAR, and 50% of the population earn more than 533,000 ZAR.

If you are earning more than the median salary, that's a good indicator that you are being paid well.

If you're not earning more than the median salary, your objective should be to increase your earnings to be at least as high as the median salary (which you can do by asking for a pay rise, looking for a better paying job, etc).

Percentiles

Percentiles are similar to the median salary, but instead of looking at the middle value, they look at the values in the top and bottom half of the distribution.

For the average Clinical Project Manager salary in Cape Town, 25% of the population are earning less than 341,400 ZAR while 75% of the population earn more than 341,400 ZAR.

75% of the population earn less than 712,100 ZAR, and 25% of the population earn more than 712,100 ZAR.

Like the median salary, the 25th and 75th percentile salaries can be used to determine which quartile you fall into so that you know whether you are being paid well enough compared to others in your profession and location.

The difference between a median and an average salary

The median and average salary are both indicators you can use to see if you are being paid fairly based on the overall population.

  • If your salary is higher than the average and the median salary, you are earning well compared to others.
  • If your salary is lower than the average and the median salary, it could indicate you are not being paid well enough.
  • If you are somewhere in between then it's tricky to determine if you are being paid well enough and you might need to research more closely.

Clinical Project Manager Salary by Experience Level in Cape Town

The most important factor in determining your salary after the specific profession is the number of years experience you have. It stands to reason that more years of experience will result in a higher wage.

We have researched the average Clinical Project Manager salary based on years of experience to give you an idea of how the average changes once you've worked for a certain amount of time.

  • 0 - 2 Years Experience. A Clinical Project Manager in Cape Town that has less than two years of experience can expect to earn somewhere in the region of 257,700 ZAR.
  • 2 - 5 Years Experience. With two to five years of experience the average Clinical Project Manager salary would increase to 345,100 ZAR.
  • 5 - 10 Years Experience. From five to ten years of experience as a Clinical Project Manager, the average salary would be 510,000 ZAR.
  • 10 - 15 Years Experience. Once you have more than ten years of experience the average salary reaches around 620,300 ZAR.
  • 15 - 20 Years Experience. A Clinical Project Manager with 15 to 20 years of experience can earn an average of 677,100 ZAR.
  • 20+ Years Experience. For a Clinical Project Manager with more than 20 years, the expected average salary increases to 731,700 ZAR.

Average Salary by Experience Chart

0-2 Years-
257,700 ZAR
2-5 Years+34%
345,100 ZAR
5-10 Years+48%
510,000 ZAR
10-15 Years+22%
620,300 ZAR
15-20 Years+9%
677,100 ZAR
20+ Years+8%
731,700 ZAR

Clinical Project Manager Salary by Education Level in Cape Town

As well as experience in a job, your education plays a big role in how much you can earn. A lot of higher paying positions require a high level of education, but how much can a degree increase your salary?

In our research we have compared the salaries of employees in the same job and career level with different levels of education to see how much more you can earn at each education level.

The salary you can earn based on your education is very specific to both your location and the career path you choose.

In our research, we looked at the average salary for a Clinical Project Manager in Cape Town based on the education level of the employees in order to find out whether a better education level would increase your salary.

  • Bachelor's Degree. A Clinical Project Manager in Cape Town with a bachelor's degree education can earn an average salary of 301,800 ZAR.
  • Master's Degree. A Clinical Project Manager in Cape Town with a master's degree education can earn an average salary of 578,500 ZAR.

Average Salary by Education Chart

Bachelor's Degree-
301,800 ZAR
Master's Degree+93%
578,500 ZAR

How Much is a Master's Degree or MBA Program?

The approximate cost of a master's degree or post-graduate program like an MBA in South Africa is around 156,000 to 467,000 ZAR and takes two years to complete.

As you can see above, there are financial benefits from reaching master's degree level, but don't expect to see much of a salary increase until you have completed the degree.

It's common for people to pursue an MBA or other post-graduate program in order to switch to a a job that pays more. On average, you can expect to earn around 10% more when switching to a new company.

Whether you decide to pursue a master's degree depends on many factors. If you are able to afford it, the numbers suggest that the return on investment is worth it and you could recover the costs in a few years from the salary increase you would receive.

Clinical Project Manager Salary Compared by Gender

In the modern age, we know that there should never be a pay gap between men and women. Unfortunately, in many professions, there is still a significant difference between the salaries earned by men when compared to the salary of women in the same job.

In Cape Town, a male clinical project manager will earn an average of 510,000 ZAR, while a female clinical project manager will earn around 455,400 ZAR.

This means that a male clinical project manager earns approximately 12% more than a female clinical project manager for performing the same job.

Average Salary by Gender Chart in Cape Town

Male-
510,000 ZAR
Female-12%
455,400 ZAR

Clinical Project Manager Average Pay Raise in Cape Town

In many countries, an annual pay raise is often given to employees to reward their service with a salary increase.

From our research, we can see that the average pay raise for a Clinical Project Manager in Cape Town is around 11% every 19 months.

The national average pay raise across all professions and industries in South Africa is around 8% every 18 months.

In this case, we can see that the number of months between the average pay raise is higher than the typical 12 months.

To make the data more meaningful, we can calculate what the approximate annual pay raise would be using a simple formula:

Annual Increase = ( Increase Rate ÷ Months ) × 12

So for this example, it would be:

Annual Increase = ( 11 ÷ 19 ) × 12  = 7%

What this means is that a Clinical Project Manager in Cape Town can expect to receive an average pay raise of around 7% every 12 months.

Annual Pay Raise by Industry in Cape Town for 2026

In the chart below, you can see the average annual pay raise percentages for each of the major industries in South Africa.

You will see that companies in bigger and more lucrative industries tend to have the higher annual pay raises.

Banking-
3%
Energy-
6%
Information Technology-
9%
Healthcare-
3%
Travel-
6%
Construction-
9%
Education-
3%

Clinical Project Manager Bonus and Incentive Rates in Cape Town

Another part of your overall compensation in a job is how much bonus you receive. Some job roles will be more likely to pay a bonus than others and also more likely to have higher bonus rates.

Generally speaking, jobs that are more involved with direct revenue generation will receive higher bonuses based on the performance towards revenue goals.

A Clinical Project Manager is a moderate bonus based job, with 59% of employees reporting at least one bonus in the last 12 months.

41% reported that they had not received any bonuses in the previous 12 months.

For the employees that did receive a bonus in the previous 12 months, the reported bonuses ranged from 2% to 7%.

Received Bonus-
59%
No Bonus-
41%

What are the Types of Bonus?

There are a number of difference types of bonus you can receive in a job. Including:

  • Individual performance bonus - This is a bonus that is awarded to an individual employee for general performance in the job. It's the most common type of bonus.
  • Company performance bonus - This is a bonus that is awarded to a company employees to share profit with the staff.
  • Goal based bonus - This is a bonus that is awarded to an individual employee (or a team) for achieving specific goals, objectives, or milestones.
  • Holiday bonus - This type of bonus is usually paid around the holidays, often the end of the year, and is a token of appreciation for the hard work throughout the year.

Government vs Private Sector Salaries

Another commonly asked question is whether you get paid a higher salary working in the public (government) sector or the private sector.

Public sector employees in South Africa earn approximately 7% more than private sector employees in the same role.

Public Sector-
386,400 ZAR
Private Sector-7%
361,500 ZAR

Salaries for Jobs Similar to a Clinical Project Manager

In the table below, we have salary information for jobs that are similar to a Clinical Project Manager in Cape Town.

Job TitleCategorySalary
Assistant PharmacistPharmaceutical and Biotechnology317,700 ZAR
Assistant Pharmacy DirectorPharmaceutical and Biotechnology631,200 ZAR
Associate Medical Affairs DirectorPharmaceutical and Biotechnology852,600 ZAR
Bioinformatics ScientistPharmaceutical and Biotechnology746,600 ZAR
Bioinformatics TechnicianPharmaceutical and Biotechnology344,600 ZAR
Biological ScientistPharmaceutical and Biotechnology808,000 ZAR
Biological TechnicianPharmaceutical and Biotechnology345,700 ZAR
Biomedical EngineerPharmaceutical and Biotechnology341,400 ZAR
Biomedical Engineering DirectorPharmaceutical and Biotechnology664,500 ZAR
BiostatisticianPharmaceutical and Biotechnology535,900 ZAR
Biotechnologist Pharmaceutical and Biotechnology524,700 ZAR
Biotechnology Lead Data ManagerPharmaceutical and Biotechnology382,600 ZAR
Chemical Process TechnicianPharmaceutical and Biotechnology369,900 ZAR
Clinical ConsultantPharmaceutical and Biotechnology498,500 ZAR
Clinical Data ManagerPharmaceutical and Biotechnology524,400 ZAR
Clinical Data SpecialistPharmaceutical and Biotechnology480,300 ZAR
Clinical Informatics SpecialistPharmaceutical and Biotechnology371,100 ZAR
Clinical Operations ManagerPharmaceutical and Biotechnology754,900 ZAR
Clinical PharmacistPharmaceutical and Biotechnology516,100 ZAR
Clinical Pharmacy SpecialistPharmaceutical and Biotechnology581,300 ZAR
Clinical ProgrammerPharmaceutical and Biotechnology273,300 ZAR
Clinical Research AssociatePharmaceutical and Biotechnology459,700 ZAR
Clinical Research ManagerPharmaceutical and Biotechnology724,000 ZAR
Clinical Study ManagerPharmaceutical and Biotechnology656,800 ZAR
Compliance SpecialistPharmaceutical and Biotechnology507,300 ZAR
Cytology Laboratory TechnologistPharmaceutical and Biotechnology419,400 ZAR
CytotechnologistPharmaceutical and Biotechnology417,100 ZAR
GCP AuditorPharmaceutical and Biotechnology459,300 ZAR
Hospital Pharmacy TechnicianPharmaceutical and Biotechnology389,200 ZAR
Manufacturing EngineerPharmaceutical and Biotechnology440,200 ZAR
Medical Affairs DirectorPharmaceutical and Biotechnology752,600 ZAR
Medical Representative Pharmaceutical and Biotechnology325,800 ZAR
Medical Science LiaisonPharmaceutical and Biotechnology548,500 ZAR
Molecular and Cellular BiologistPharmaceutical and Biotechnology810,200 ZAR
Nuclear PharmacistPharmaceutical and Biotechnology541,700 ZAR
Pharmaceutical ManagerPharmaceutical and Biotechnology879,800 ZAR
Pharmaceutical Manufacturing LeadPharmaceutical and Biotechnology904,700 ZAR
Pharmaceutical Operations Excellence ManagerPharmaceutical and Biotechnology830,500 ZAR
Pharmaceutical Process EngineerPharmaceutical and Biotechnology447,700 ZAR
Pharmaceutical Production Assistant ManagerPharmaceutical and Biotechnology576,500 ZAR
Pharmaceutical Project ManagerPharmaceutical and Biotechnology516,100 ZAR
Pharmaceutical Quality AuditorPharmaceutical and Biotechnology572,200 ZAR
Pharmaceutical Regulatory Affairs AssistantPharmaceutical and Biotechnology397,900 ZAR
Pharmaceutical Regulatory Affairs ManagerPharmaceutical and Biotechnology548,800 ZAR
Pharmaceutical Regulatory Affairs SpecialistPharmaceutical and Biotechnology428,400 ZAR
Pharmaceutical RepresentativePharmaceutical and Biotechnology325,900 ZAR
Pharmaceutical Research AssociatePharmaceutical and Biotechnology524,700 ZAR
Pharmaceutical Research ScientistPharmaceutical and Biotechnology737,000 ZAR
Pharmaceutical ResearcherPharmaceutical and Biotechnology739,500 ZAR
Pharmaceutical Sales ManagerPharmaceutical and Biotechnology698,200 ZAR
Pharmaceutical Sales RepresentativePharmaceutical and Biotechnology341,900 ZAR
Pharmaceutical Sales and Marketing ManagerPharmaceutical and Biotechnology615,300 ZAR
Pharmaceutical Supply Chain ManagerPharmaceutical and Biotechnology748,600 ZAR
Pharmaceutical Team LeaderPharmaceutical and Biotechnology548,800 ZAR
Pharmaceutical TechnologistPharmaceutical and Biotechnology367,200 ZAR
PharmacistPharmaceutical and Biotechnology519,300 ZAR
Pharmacy AidePharmaceutical and Biotechnology341,900 ZAR
Pharmacy ManagerPharmaceutical and Biotechnology731,700 ZAR
Pharmacy Stock ControllerPharmaceutical and Biotechnology288,100 ZAR
Pharmacy TechnicianPharmaceutical and Biotechnology283,400 ZAR
Records Management CoordinatorPharmaceutical and Biotechnology282,300 ZAR
Shift EncapsulatorPharmaceutical and Biotechnology308,900 ZAR
Staff PharmacistPharmaceutical and Biotechnology478,100 ZAR

Salary Comparison by City

If you want to compare salaries with different cities in South Africa, you can use the links below to explore the data for each specific city we have researched.

CityAverage Salary
Bloemfontein442,200 ZAR
Durban466,300 ZAR
Johannesburg487,600 ZAR
Port Elizabeth442,200 ZAR
Pretoria472,100 ZAR

Cite This Resource

Use the tool below to generate a reference for this page in common citation styles.

  • <a href="https://worldsalaries.com/average-clinical-project-manager-salary-in-cape-town/south-africa/">Average Clinical Project Manager Salary in Cape Town, South Africa for 2026</a>

  • "Average Clinical Project Manager Salary in Cape Town, South Africa for 2026." World Salaries. Accessed January 5, 2026. https://worldsalaries.com/average-clinical-project-manager-salary-in-cape-town/south-africa/.

  • "Average Clinical Project Manager Salary in Cape Town, South Africa for 2026." World Salaries, https://worldsalaries.com/average-clinical-project-manager-salary-in-cape-town/south-africa/. Accessed 5 January, 2026.

  • Average Clinical Project Manager Salary in Cape Town, South Africa for 2026. World Salaries. Retrieved from https://worldsalaries.com/average-clinical-project-manager-salary-in-cape-town/south-africa/.