Average Clinical Operations Manager Salary in Pune, India for 2026

In this article, we will look at the average Clinical Operations Manager salary for 2026 in Pune and how that compares to other countries and professions. We'll also look at interesting salary data points like median salary, 25th and 75th percentile salaries, salary amounts based on experience, bonus ranges and more!

The data in this article has been compiled using official government salary data, salary surveys, and other sources such as job postings which contain salary information.

All salary information is in the local currency, which is the Indian rupee. To keep things simple, we are using the INR currency code instead of the currency symbol .

How Much Does a Clinical Operations Manager Make in Pune?

A Clinical Operations Manager working in Pune will typically earn around 728,500 INR per year, and this can range from the lowest average salary of about 378,800 INR to the highest average salary of 1,114,700 INR.

Average Annual Salary728,500 INR
Average Monthly Salary60,708 INR
Average Lowest Salary378,800 INR
Lowest Monthly Salary31,566 INR
Average Highest Salary1,114,700 INR
Highest Monthly Salary92,891 INR

These are average salaries for a Clinical Operations Manager in Pune and include benefits such as housing and transport. It's also possible for a Clinical Operations Manager to earn more or less than the average salaries shown above.

Clinical Operations Manager salaries will vary a lot based on your experience, location, skills, and gender. Keep reading below to research more data on each of these areas.

Distribution of Clinical Operations Manager Salaries in Pune

So we've looked at the average salaries a Clinical Operations Manager will earn in Pune. The next interesting data point is the distribution of salaries.

Salary ranges

We already know that a Clinical Operations Manager can earn between 378,800 INR and 1,114,700 INR on average in Pune. This is known as the range in statistics.

The difference between the maximum and minimum values is a good indicator of variability in salaries, and can be used by employers to figure out how much they can expect to pay, and for employees to know how much they can earn.

Median salary

The median salary for a Clinical Operations Manager in Pune is 698,200 INR. This is the middle value in the distribution of salaries.

What this means is that approximately 50% of the population earn less than 698,200 INR, and 50% of the population earn more than 698,200 INR.

If you are earning more than the median salary, that's a good indicator that you are being paid well.

If you're not earning more than the median salary, your objective should be to increase your earnings to be at least as high as the median salary (which you can do by asking for a pay rise, looking for a better paying job, etc).

Percentiles

Percentiles are similar to the median salary, but instead of looking at the middle value, they look at the values in the top and bottom half of the distribution.

For the average Clinical Operations Manager salary in Pune, 25% of the population are earning less than 485,200 INR while 75% of the population earn more than 485,200 INR.

75% of the population earn less than 870,700 INR, and 25% of the population earn more than 870,700 INR.

Like the median salary, the 25th and 75th percentile salaries can be used to determine which quartile you fall into so that you know whether you are being paid well enough compared to others in your profession and location.

The difference between a median and an average salary

The median and average salary are both indicators you can use to see if you are being paid fairly based on the overall population.

  • If your salary is higher than the average and the median salary, you are earning well compared to others.
  • If your salary is lower than the average and the median salary, it could indicate you are not being paid well enough.
  • If you are somewhere in between then it's tricky to determine if you are being paid well enough and you might need to research more closely.

Clinical Operations Manager Salary by Experience Level in Pune

The most important factor in determining your salary after the specific profession is the number of years experience you have. It stands to reason that more years of experience will result in a higher wage.

We have researched the average Clinical Operations Manager salary based on years of experience to give you an idea of how the average changes once you've worked for a certain amount of time.

  • 0 - 2 Years Experience. A Clinical Operations Manager in Pune that has less than two years of experience can expect to earn somewhere in the region of 430,000 INR.
  • 2 - 5 Years Experience. With two to five years of experience the average Clinical Operations Manager salary would increase to 578,500 INR.
  • 5 - 10 Years Experience. From five to ten years of experience as a Clinical Operations Manager, the average salary would be 751,100 INR.
  • 10 - 15 Years Experience. Once you have more than ten years of experience the average salary reaches around 908,200 INR.
  • 15 - 20 Years Experience. A Clinical Operations Manager with 15 to 20 years of experience can earn an average of 995,000 INR.
  • 20+ Years Experience. For a Clinical Operations Manager with more than 20 years, the expected average salary increases to 1,043,600 INR.

Average Salary by Experience Chart

0-2 Years-
430,000 INR
2-5 Years+34%
578,500 INR
5-10 Years+30%
751,100 INR
10-15 Years+21%
908,200 INR
15-20 Years+9%
995,000 INR
20+ Years+5%
1,043,600 INR

Clinical Operations Manager Salary by Education Level in Pune

As well as experience in a job, your education plays a big role in how much you can earn. A lot of higher paying positions require a high level of education, but how much can a degree increase your salary?

In our research we have compared the salaries of employees in the same job and career level with different levels of education to see how much more you can earn at each education level.

The salary you can earn based on your education is very specific to both your location and the career path you choose.

In our research, we looked at the average salary for a Clinical Operations Manager in Pune based on the education level of the employees in order to find out whether a better education level would increase your salary.

  • Bachelor's Degree. A Clinical Operations Manager in Pune with a bachelor's degree education can earn an average salary of 555,800 INR.
  • Master's Degree. A Clinical Operations Manager in Pune with a master's degree education can earn an average salary of 689,900 INR.
  • PhD. A Clinical Operations Manager in Pune with a phd education can earn an average salary of 1,099,200 INR.

Average Salary by Education Chart

Bachelor's Degree-
555,800 INR
Master's Degree+24%
689,900 INR
PhD+60%
1,099,200 INR

How Much is a Master's Degree or MBA Program?

The approximate cost of a master's degree or post-graduate program like an MBA in India is around 160,000 to 479,000 INR and takes two years to complete.

As you can see above, there are financial benefits from reaching master's degree level, but don't expect to see much of a salary increase until you have completed the degree.

It's common for people to pursue an MBA or other post-graduate program in order to switch to a a job that pays more. On average, you can expect to earn around 10% more when switching to a new company.

Whether you decide to pursue a master's degree depends on many factors. If you are able to afford it, the numbers suggest that the return on investment is worth it and you could recover the costs in a few years from the salary increase you would receive.

Clinical Operations Manager Salary Compared by Gender

In the modern age, we know that there should never be a pay gap between men and women. Unfortunately, in many professions, there is still a significant difference between the salaries earned by men when compared to the salary of women in the same job.

In Pune, a male clinical operations manager will earn an average of 759,300 INR, while a female clinical operations manager will earn around 681,500 INR.

This means that a male clinical operations manager earns approximately 11% more than a female clinical operations manager for performing the same job.

Average Salary by Gender Chart in Pune

Male-
759,300 INR
Female-11%
681,500 INR

Clinical Operations Manager Average Pay Raise in Pune

In many countries, an annual pay raise is often given to employees to reward their service with a salary increase.

From our research, we can see that the average pay raise for a Clinical Operations Manager in Pune is around 12% every 17 months.

The national average pay raise across all professions and industries in India is around 9% every 16 months.

In this case, we can see that the number of months between the average pay raise is higher than the typical 12 months.

To make the data more meaningful, we can calculate what the approximate annual pay raise would be using a simple formula:

Annual Increase = ( Increase Rate ÷ Months ) × 12

So for this example, it would be:

Annual Increase = ( 12 ÷ 17 ) × 12  = 8%

What this means is that a Clinical Operations Manager in Pune can expect to receive an average pay raise of around 8% every 12 months.

Annual Pay Raise by Industry in Pune for 2026

In the chart below, you can see the average annual pay raise percentages for each of the major industries in India.

You will see that companies in bigger and more lucrative industries tend to have the higher annual pay raises.

Banking-
1%
Energy-
2%
Information Technology-
3%
Healthcare-
4%
Travel-
5%
Construction-
6%
Education-
7%

Clinical Operations Manager Bonus and Incentive Rates in Pune

Another part of your overall compensation in a job is how much bonus you receive. Some job roles will be more likely to pay a bonus than others and also more likely to have higher bonus rates.

Generally speaking, jobs that are more involved with direct revenue generation will receive higher bonuses based on the performance towards revenue goals.

A Clinical Operations Manager is a high bonus based job, with 80% of employees reporting at least one bonus in the last 12 months.

20% reported that they had not received any bonuses in the previous 12 months.

For the employees that did receive a bonus in the previous 12 months, the reported bonuses ranged from 6% to 8%.

Received Bonus-
80%
No Bonus-
20%

What are the Types of Bonus?

There are a number of difference types of bonus you can receive in a job. Including:

  • Individual performance bonus - This is a bonus that is awarded to an individual employee for general performance in the job. It's the most common type of bonus.
  • Company performance bonus - This is a bonus that is awarded to a company employees to share profit with the staff.
  • Goal based bonus - This is a bonus that is awarded to an individual employee (or a team) for achieving specific goals, objectives, or milestones.
  • Holiday bonus - This type of bonus is usually paid around the holidays, often the end of the year, and is a token of appreciation for the hard work throughout the year.

Government vs Private Sector Salaries

Another commonly asked question is whether you get paid a higher salary working in the public (government) sector or the private sector.

Public sector employees in India earn approximately 6% more than private sector employees in the same role.

Public Sector-
392,300 INR
Private Sector-6%
371,100 INR

Salaries for Jobs Similar to a Clinical Operations Manager

In the table below, we have salary information for jobs that are similar to a Clinical Operations Manager in Pune.

Job TitleCategorySalary
Assistant PharmacistPharmaceutical and Biotechnology322,600 INR
Assistant Pharmacy DirectorPharmaceutical and Biotechnology597,800 INR
Associate Medical Affairs DirectorPharmaceutical and Biotechnology825,900 INR
Bioinformatics ScientistPharmaceutical and Biotechnology743,300 INR
Bioinformatics TechnicianPharmaceutical and Biotechnology341,400 INR
Biological ScientistPharmaceutical and Biotechnology798,900 INR
Biological TechnicianPharmaceutical and Biotechnology341,400 INR
Biomedical EngineerPharmaceutical and Biotechnology322,600 INR
Biomedical Engineering DirectorPharmaceutical and Biotechnology628,000 INR
BiostatisticianPharmaceutical and Biotechnology507,300 INR
Biotechnologist Pharmaceutical and Biotechnology496,100 INR
Biotechnology Lead Data ManagerPharmaceutical and Biotechnology388,100 INR
Chemical Process TechnicianPharmaceutical and Biotechnology357,300 INR
Clinical ConsultantPharmaceutical and Biotechnology498,000 INR
Clinical Data ManagerPharmaceutical and Biotechnology493,000 INR
Clinical Data SpecialistPharmaceutical and Biotechnology454,300 INR
Clinical Informatics SpecialistPharmaceutical and Biotechnology378,800 INR
Clinical PharmacistPharmaceutical and Biotechnology485,300 INR
Clinical Pharmacy SpecialistPharmaceutical and Biotechnology588,500 INR
Clinical ProgrammerPharmaceutical and Biotechnology258,400 INR
Clinical Project ManagerPharmaceutical and Biotechnology454,300 INR
Clinical Research AssociatePharmaceutical and Biotechnology430,000 INR
Clinical Research ManagerPharmaceutical and Biotechnology701,400 INR
Clinical Study ManagerPharmaceutical and Biotechnology615,700 INR
Compliance SpecialistPharmaceutical and Biotechnology514,300 INR
Cytology Laboratory TechnologistPharmaceutical and Biotechnology397,900 INR
CytotechnologistPharmaceutical and Biotechnology397,900 INR
GCP AuditorPharmaceutical and Biotechnology428,400 INR
Hospital Pharmacy TechnicianPharmaceutical and Biotechnology369,300 INR
Manufacturing EngineerPharmaceutical and Biotechnology414,000 INR
Medical Affairs DirectorPharmaceutical and Biotechnology768,900 INR
Medical Representative Pharmaceutical and Biotechnology330,900 INR
Medical Science LiaisonPharmaceutical and Biotechnology558,300 INR
Molecular and Cellular BiologistPharmaceutical and Biotechnology810,200 INR
Nuclear PharmacistPharmaceutical and Biotechnology507,300 INR
Pharmaceutical ManagerPharmaceutical and Biotechnology854,300 INR
Pharmaceutical Manufacturing LeadPharmaceutical and Biotechnology913,400 INR
Pharmaceutical Operations Excellence ManagerPharmaceutical and Biotechnology798,900 INR
Pharmaceutical Process EngineerPharmaceutical and Biotechnology448,500 INR
Pharmaceutical Production Assistant ManagerPharmaceutical and Biotechnology548,800 INR
Pharmaceutical Project ManagerPharmaceutical and Biotechnology514,300 INR
Pharmaceutical Quality AuditorPharmaceutical and Biotechnology539,700 INR
Pharmaceutical Regulatory Affairs AssistantPharmaceutical and Biotechnology406,300 INR
Pharmaceutical Regulatory Affairs ManagerPharmaceutical and Biotechnology553,800 INR
Pharmaceutical Regulatory Affairs SpecialistPharmaceutical and Biotechnology433,800 INR
Pharmaceutical RepresentativePharmaceutical and Biotechnology330,900 INR
Pharmaceutical Research AssociatePharmaceutical and Biotechnology496,100 INR
Pharmaceutical Research ScientistPharmaceutical and Biotechnology731,700 INR
Pharmaceutical ResearcherPharmaceutical and Biotechnology714,600 INR
Pharmaceutical Sales ManagerPharmaceutical and Biotechnology714,600 INR
Pharmaceutical Sales RepresentativePharmaceutical and Biotechnology330,900 INR
Pharmaceutical Sales and Marketing ManagerPharmaceutical and Biotechnology597,800 INR
Pharmaceutical Supply Chain ManagerPharmaceutical and Biotechnology765,100 INR
Pharmaceutical Team LeaderPharmaceutical and Biotechnology539,700 INR
Pharmaceutical TechnologistPharmaceutical and Biotechnology372,600 INR
PharmacistPharmaceutical and Biotechnology485,300 INR
Pharmacy AidePharmaceutical and Biotechnology322,600 INR
Pharmacy ManagerPharmaceutical and Biotechnology684,900 INR
Pharmacy Stock ControllerPharmaceutical and Biotechnology290,800 INR
Pharmacy TechnicianPharmaceutical and Biotechnology283,700 INR
Records Management CoordinatorPharmaceutical and Biotechnology266,000 INR
Shift EncapsulatorPharmaceutical and Biotechnology294,300 INR
Staff PharmacistPharmaceutical and Biotechnology485,300 INR

Salary Comparison by City

If you want to compare salaries with different cities in India, you can use the links below to explore the data for each specific city we have researched.

CityAverage Salary
Ahmadabad816,900 INR
Bangalore821,500 INR
Bhopal689,900 INR
Chennai814,100 INR
Coimbatore707,600 INR
Delhi803,400 INR
Ghaziabad693,100 INR
Hyderabad830,500 INR
Indore707,700 INR
Jaipur721,600 INR
Kanpur745,000 INR
Kolkata767,400 INR
Lucknow743,300 INR
Ludhiana709,600 INR
Madurai649,700 INR
Mumbai799,300 INR
Nagpur761,400 INR
Patna672,600 INR
Pimpri-Chinchwad691,200 INR
Surat781,200 INR
Vadodara664,500 INR
Visakhapatnam705,500 INR
agra643,400 INR

Salary Comparison by State

The table below includes links to the average salary for each state in India.

StateAverage Salary
Andaman & Nicobar Islands626,800 INR
Andhra Pradesh791,600 INR
Arunachal Pradesh658,300 INR
Assam737,000 INR
Bihar893,500 INR
Chandigarh658,300 INR
Chhatisgarh759,300 INR
Dadra & Nagar Haveli619,800 INR
Daman & Diu595,300 INR
Delhi701,400 INR
Goa692,500 INR
Gujarat824,800 INR
Haryana744,700 INR
Himachal Pradesh702,800 INR
Jammu & Kashmir705,500 INR
Jharkhand747,400 INR
Karnataka844,600 INR
Kerala791,600 INR
Lakshadweep606,400 INR
Madhya Pradesh824,800 INR
Maharashtra824,800 INR
Manipur731,700 INR
Meghalaya712,100 INR
Mizoram663,200 INR
Nagaland681,500 INR
Orissa780,700 INR
Pondicherry637,500 INR
Punjab799,300 INR
Rajasthan858,400 INR
Sikkim645,800 INR
Tamil Nadu823,900 INR
Tripura691,200 INR
Uttar Pradesh908,200 INR
Uttaranchal693,100 INR
West Bengal870,700 INR

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